| SN | PROGRAMME |
| 1. | Master of Social Work |
| 2. | Master of Arts in Philosophy |
| 3. | Master of Arts in Public Policy and Administration |
| 4. | Master of Arts in Religion |
| 5. | Master of Arts in Linguistics |
| 6. | Master of Arts (Kiswahili) |
| School of Science & Information Sciences |
| SN | PROGRAMME |
| 1. | Master of Science in Applied Statistics |
| 2. | Master of Science in Chemistry |
| 3. | Master of Science in Physics |
| 4. | Master of Science in Pure Mathematics |
| 5. | Master of Science in Computer Science |
| 6. | Master of Science in Information Science |
| 7. | Master of Science in Applied Entomology |
| School of Education |
| SN | PROGRAMME |
| 1. | Master of Education (Executive) in Leadership & Policy Studies |
| 2. | Master of Education (Curriculum, Instruction and Media) |
| 3. | Master of Education (Educational Administration) |
| 4. | Master of Education (Early Childhood Development) |
| 5. | Master of Education (Educational Psychology) |
| 6. | Master of Education (Sociology of Education) |
| 7. | Master of Education (History of Education) |
| 8. | Master of Education (Comparative Education) |
| 9. | Master of Education (Guidance & Counselling) |
| 10. | Master of Education (Philosophy of Education) |
| 11. | Master of Education (Special Needs Education) |
| School of Business and Economics |
| SN | PROGRAMME |
| 1. | Master of Science in Human Resource Management |
| 2. | Master of Business Administration |
| 3. | Master of Science in Agricultural Economics and Resource Management |
| 3. | Master of Science in Economic Policy Analysis and Management |
| 4. | Master of Science in Economics and Statistics |
| 5. | Master of Science in Financial Economics |
| School of Tourism & Natural Resource Management |
| SN | PROGRAMME |
| 1. | Master of Arts in Geography |
| 2. | Master of Environmental Planning and Management |
| 3. | Master of Science in Environmental Studies |
| 4. | Master of Science in Land Resource Management |
| 5. | Master of Science in Wildlife Resource Management. |